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ROBOT is licensed under the
BSD 3-Clause License.
Theme by orderedlist
Problem: An entity does not have a definition or elucidation. This may cause confusion or misuse of the entity. Excludes deprecated entities.
OBO Foundry Principle: 6 - Textual Definitions
Solution: Add a definition.
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
SELECT DISTINCT ?entity ?property ?value WHERE {
VALUES ?property { obo:IAO_0000115 }
?entity ?any ?o
FILTER NOT EXISTS { ?entity ?property ?value }
FILTER NOT EXISTS { ?entity obo:IAO_0000600 ?elucidation }
FILTER NOT EXISTS { ?entity a owl:Ontology }
FILTER NOT EXISTS { ?entity a owl:NamedIndividual }
FILTER NOT EXISTS { ?entity owl:deprecated true }
FILTER NOT EXISTS {
?entity rdfs:subPropertyOf oboInOwl:SubsetProperty .
}
FILTER EXISTS {
?entity ?prop2 ?object .
FILTER (?prop2 != rdf:type)
FILTER (?prop2 != owl:equivalentClass)
FILTER (?prop2 != owl:disjointWith)
FILTER (?prop2 != owl:equivalentProperty)
FILTER (?prop2 != owl:sameAs)
FILTER (?prop2 != owl:differentFrom)
FILTER (?prop2 != owl:inverseOf)
}
FILTER (!isBlank(?entity)) }
ORDER BY ?entity