ROBOT

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ROBOT is licensed under the
BSD 3-Clause License.
Theme by orderedlist

Invalid Xref

Problem: A database_cross_reference is not in CURIE format.

Solution: Replace the reference with a CURIE.

PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>

SELECT DISTINCT ?entity ?property ?value WHERE {
 VALUES ?property {oboInOwl:hasDbXref}
 ?entity ?property ?value .
 FILTER (!regex(?value, "^[a-z|A-Z|_|\\-|0-9]*:(?!$)\\S*$"))
 FILTER (!isBlank(?entity))
}
ORDER BY ?entity