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BSD 3-Clause License.
Theme by orderedlist

Missing Synonym Type Declaration

Problem: A synonym type is used in an annotation, but is not properly declared as a child of oboInOwl:SynonymTypeProperty. This can cause problems with conversions to OBO format.

Solution: Make the synonym type a child of oboInOwl:SynonymTypeProperty.

PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>

SELECT DISTINCT ?entity ?property ?value WHERE {
    VALUES ?property { rdfs:subPropertyOf }
    ?x oboInOwl:hasSynonymType ?entity .
    FILTER NOT EXISTS { ?entity ?property oboInOwl:SynonymTypeProperty }
}
ORDER BY ?entity